498 research outputs found
Photoprocesses in protoplanetary disks
Circumstellar disks are exposed to intense ultraviolet radiation from the
young star. In the inner disks, the UV radiation can be enhanced by more than
seven orders of magnitude compared with the average interstellar field,
resulting in a physical and chemical structure that resembles that of a dense
photon-dominated region (PDR). This intense UV field affects the chemistry, the
vertical structure of the disk, and the gas temperature, especially in the
surface layers of the disk. The parameters which make disks different from
traditional PDRs are discussed, including the shape of the UV radiation field,
grain growth, the absence of PAHs, the gas/dust ratio and the presence of inner
holes. New photorates for selected species, including simple ions, are
presented. Also, a summary of available cross sections at Lyman alpha 1216 A is
made. Rates are computed for radiation fields with color temperatures ranging
from 4000 to 30,000 K, and can be applied to a wide variety of astrophysical
regions including exo-planetary atmospheres. The importance of photoprocesses
is illustrated for a number of representative disk models, including disk
models with grain growth and settling.Comment: A website with the final published version and all photodissociation
cross sections and rates can be found at
http://www.strw.leidenuniv.nl/~ewine/phot
Built-in and induced polarization across LaAlO/SrTiO heterojunctions
Ionic crystals terminated at oppositely charged polar surfaces are inherently
unstable and expected to undergo surface reconstructions to maintain
electrostatic stability. Essentially, an electric field that arises between
oppositely charged atomic planes gives rise to a built-in potential that
diverges with thickness. In ultra thin film form however the polar crystals are
expected to remain stable without necessitating surface reconstructions, yet
the built-in potential has eluded observation. Here we present evidence of a
built-in potential across polar \lao ~thin films grown on \sto ~substrates, a
system well known for the electron gas that forms at the interface. By
performing electron tunneling measurements between the electron gas and a
metallic gate on \lao ~we measure a built-in electric field across \lao ~of 93
meV/\AA. Additionally, capacitance measurements reveal the presence of an
induced dipole moment near the interface in \sto, illuminating a unique
property of \sto ~substrates. We forsee use of the ionic built-in potential as
an additional tuning parameter in both existing and novel device architectures,
especially as atomic control of oxide interfaces gains widespread momentum.Comment: 6 pages, 4 figures. Submitted to Nature physics on May 1st, 201
Evolving, dynamic clustering of spatio/spectro-temporal data in 3D spiking neural network models and a case study on EEG data
Clustering is a fundamental data processing technique. While clustering of static (vector based) data and of fixed window size time series have been well explored, dynamic clustering of spatiotemporal data has been little researched if at all. Especially when patterns of changes (events) in the data across space and time have to be captured and understood. The paper presents novel methods for clustering of spatiotemporal data using the NeuCube spiking neural network (SNN) architecture. Clusters of spatiotemporal data were created and modified on-line in a continuous, incremental way, where spatiotemporal relationships of changes in variables are incrementally learned in a 3D SNN model and the model connectivity and spiking activity are incrementally clustered. Two clustering methods were proposed for SNN, one performed during unsupervised and one—during supervised learning models. Before submitted to the models, the data is encoded as spike trains, a spike representing a change in the variable value (an event). During the unsupervised learning, the cluster centres were predefined by the spatial locations of the input data variables in a 3D SNN model. Then clusters are evolving during the learning, i.e. they are adapted continuously over time reflecting the dynamics of the changes in the data. In the supervised learning, clusters represent the dynamic sequence of neuron spiking activities in a trained SNN model, specific for a particular class of data or for an individual instance. We illustrate the proposed clustering method on a real case study of spatiotemporal EEG data, recorded from three groups of subjects during a cognitive task. The clusters were referred back to the brain data for a better understanding of the data and the processes that generated it. The cluster analysis allowed to discover and understand differences on temporal sequences and spatial involvement of brain regions in response to a cognitive task
Holographic Vitrification
We establish the existence of stable and metastable stationary black hole
bound states at finite temperature and chemical potentials in global and planar
four-dimensional asymptotically anti-de Sitter space. We determine a number of
features of their holographic duals and argue they represent structural
glasses. We map out their thermodynamic landscape in the probe approximation,
and show their relaxation dynamics exhibits logarithmic aging, with aging rates
determined by the distribution of barriers.Comment: 100 pages, 25 figure
Associated Charm Production in Neutrino-Nucleus Interactions
In this paper a search for associated charm production both in neutral and
charged current -nucleus interactions is presented. The improvement of
automatic scanning systems in the {CHORUS} experiment allows an efficient
search to be performed in emulsion for short-lived particles. Hence a search
for rare processes, like the associated charm production, becomes possible
through the observation of the double charm-decay topology with a very low
background. About 130,000 interactions located in the emulsion target
have been analysed. Three events with two charm decays have been observed in
the neutral-current sample with an estimated background of 0.180.05. The
relative rate of the associated charm cross-section in deep inelastic
interactions, has been
measured. One event with two charm decays has been observed in charged-current
interactions with an estimated background of 0.180.06 and the
upper limit on associated charm production in charged-current interactions at
90% C.L. has been found to be .Comment: 10 pages, 4 figure
Importance of heterogeneity in Porhyromonas gingivalis lipopolysaccharide lipid A in tissue specific inflammatory signaling
Lipopolysaccharide (LPS) of Porphyromonas gingivalis exists in at least two known forms, O-LPS and A-LPS. A-LPS shows heterogeneity in which two isoforms designated LPS1435/1449 and LPS1690 appear responsible for tissue specific immune signalingpathways activation and increased virulence. The modification of lipid A to tetra-acylated1435/1449 and/or penta-acylated1690 fatty acids indicates poor growth conditions and bioavailability of hemin. Hemin protects P. gingivalis from serum resistance and the lipid A serves as a site for its binding. The LPS1435/1449 and LPS1690 isoforms can produce opposite effects on the human Toll-like receptors (TLR) TLR 2 and TLR 4 activation. This enabless P. gingivalis to select the conditions for its entry, survival and that of its co-habiting species in the host, orchestrating its virulence to control innate immune pathway activation and biofilm dysbiosis. Thismini review describes a number of effects that LPS1435/1449 and LPS1690 can exert on the host tissues such as deregulation of the innate immune system, subversion of host cell autophagy, regulation of outer membrane vesicle production and adverse effects on pregnancy outcome. The ability to change its LPS1435/1449 and/or LPS1690 composition may enables P. gingivalis to paralyze local pro-inflammatory cytokine production, thereby gaining access to its primary location in periodontal tissue
Septins Regulate Bacterial Entry into Host Cells
Background: Septins are conserved GTPases that form filaments and are required in many organisms for several processes including cytokinesis. We previously identified SEPT9 associated with phagosomes containing latex beads coated with the Listeria surface protein InlB. Methodology/Principal Findings: Here, we investigated septin function during entry of invasive bacteria in non-phagocytic mammalian cells. We found that SEPT9, and its interacting partners SEPT2 and SEPT11, are recruited as collars next to actin at the site of entry of Listeria and Shigella. SEPT2-depletion by siRNA decreased bacterial invasion, suggesting that septins have roles during particle entry. Incubating cells with InlB-coated beads confirmed an essential role for SEPT2. Moreover, SEPT2-depletion impaired InlB-mediated stimulation of Met-dependent signaling as shown by FRET. Conclusions/Significance: Together these findings highlight novel roles for SEPT2, and distinguish the roles of septin an
Magnetic Resonance Imaging in Huntington's Disease.
Magnetic resonance imaging (MRI) is a noninvasive technique used routinely to image the body in both clinical and research settings. Through the manipulation of radio waves and static field gradients, MRI uses the principle of nuclear magnetic resonance to produce images with high spatial resolution, appropriate for the investigation of brain structure and function
- …